Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX342038: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-248052' containing sample 'Selenomonas dianae oral taxon 139. ATCC 43527'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.5M spots, 500.1M bases, 295Mb downloads

UUID: 6dc74545-0743-4153-9647-fe5304851ac5

Design: Illumina sequencing of Selenomonas dianae ATCC 43527 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA197005 • SRP027387 • All experiments • All runs

Sample: Generic sample from Selenomonas dianae ATCC 43527

SAMN00691178 • SRS255113 • All experiments • All runs

Organism: Selenomonas dianae ATCC 43527

Library:

Name: Pond-248052

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

gssr_id: 335309.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4DYKL

material_type: DNA:DNA Somatic

primary_disease: Juvenile (localized) periodontitis

product_order: PDO-1171

product_part_number: P-MCV-0001

project: G37064

research_project: RP-208

root_sample_id: SM-3MF33

sample_id: SM-4DYKL

work_request: 36472

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-07-15 12:30:18.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.5M spots, 500.1M bases, 295Mb

Run	# of Spots	# of Bases	Size	Published
SRR960249	2,475,917	500.1M	295Mb	2013-08-30

ID:: 483518

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